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PhD Researcher

2 months ago

Guelph, Ontario, Canada Aquaculture Association Of Canada Full time
Job Summary

We are seeking a highly motivated PhD researcher to investigate the role of the gut microbiome on the health and nutrition of salmonid fishes. The successful candidate will work under the supervision of Prof. David Huyben and contribute to a 4-year research project focused on determining the contribution of nutrients from the gut microbiome to fish and influences from diet, life-stage, and genetic family.

Key Responsibilities
  • Conduct a literature review and meta-analysis on fish gut microbiome studies
  • Design and conduct bench trials (in vitro) using a Robogut bioreactor to simulate the fish gut
  • Perform feeding trials (in vivo) to determine effects of diet and family on the microbiome
  • Sample fish at Ontario fish culture stations, fish farm hatcheries, and the Ontario Aquaculture Research Centre
  • Analyze nutritional data from feeds and fish
  • Conduct gene expression, genotyping, and 16S microbiome sequence data analyses
  • Present research findings at conferences and publish papers in peer-reviewed journals
Requirements
  • Strong background in fish biology and aquaculture with additional knowledge on molecular biology, microbiology, immunology, genetics, and/or nutrition
  • MSc degree in fish biology, aquaculture, animal science, or a related field
  • Experience performing a literature review, laboratory work, data analysis, statistical analysis, and writing up results for publication
  • Molecular lab skills, including DNA/RNA extractions, DNA/RNA quantification, PCR library preparation, and/or qPCR
  • Ability to work independently, problem-solve, and think critically
  • Strong written and oral communication skills and experience presenting at workshops and/or conferences
Preferred Skills
  • Hands-on experience feeding and dissecting rainbow trout and Atlantic salmon
  • Experience assisting technicians and graduate students with fish research trials
  • Experience coding (C, Unix, or Python) and using bioinformatic pipelines on sequence data from genotyping and/or the microbiome
What We Offer

The University of Guelph is committed to equity, diversity, and inclusion in its study programs and workplaces. We encourage applications from all qualified individuals, including those from groups that are traditionally underrepresented.

Qualified candidates should send their CV, transcript, and cover letter to Prof. David Huyben with the subject "PhD application".