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Research Scientist, Phenomics Expert
3 weeks ago
About the Role
We are seeking a highly skilled Research Scientist, Phenomics Expert to join our team at the University of Calgary. This is a full-time, fixed-term position for approximately 12 months, with the possibility of extension.
Job Summary
The successful candidate will be responsible for developing and implementing novel machine learning-based methods for real-time image processing and analysis. They will work collaboratively with team members to advance software development for large-scale phenomics and act as a resource for colleagues with less experience.
Key Responsibilities:
- Develop and implement novel machine learning-based methods for real-time image processing and analysis
- Collaborate with team members to advance software development for large-scale phenomics
- Act as a resource for colleagues with less experience
- Collect, standardize, and analyze imaging data to accomplish grant research aims
- Apply programming languages such as Python, Linux bash, R, and Git
- Develop back-end code for an online web application that can store, acquire, analyze, and aggregate phenomic data
- Curate and manage large-scale databases and ensure that standards are met
- Train other staff and students how to deploy technical workflows
- Act as a resource and in-scope supervisor for junior staff members and graduate students
- Apply concepts and methods from biomedicine, medical image analysis, machine learning, and data science to guide ongoing internal and external research collaborations with respect to large-scale phenomics databases
Qualifications/Requirements:
- Doctoral degree in Bioinformatics required
- Minimum of 3-5 years of related technical experience within the fields of comparative biology, bioinformatics, phenotypic analyses, and craniofacial developmental biology required
- Advanced education and experience in bioinformatics, RNAseq analyses, QTL and GWAS mapping, and quantitative genetics required
- Advanced programming skills in imaging informatics and statistics using Bash, Python, R, and/or Julia required
- Previous experience working with large-scale databases (e.g., SQL) and biomedical imaging data required
- Previous experience working with compute clusters (e.g., Digital Research Alliance of Canada) required
- Knowledge and experience working with mouse models, including husbandry, handling, and breeding required
- Previous experience mentoring and/or teaching at the graduate or undergraduate level
- Excellent verbal and written communication skills
- Experience working and collaborating with international and diverse research groups
- Knowledge and/or experience in IT infrastructure (networking, data storage) valuable
About the University of Calgary
The University of Calgary is Canada's entrepreneurial university, located in Canada's most enterprising city. It is a top research university and one of the highest-ranked universities of its age. Founded in 1966, its 36,000 students experience an innovative learning environment, made rich by research, hands-on experiences, and entrepreneurial thinking. The salary range for this position is $40.59 - $58.63 per hour.
